DNA Binding Motif

						

			
Accessions: MA1347.1 (JASPAR 2024), M0193 (AthalianaCistrome v4_May2016), MA0968.2 (JASPAR 2024)

			
Names: bZIP68, bZIP68.DAP, T01760;
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1, AthalianaCistrome v4_May2016 2
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]

2 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: tGCCACGTsasmwwh
Weblogo: 
PSSM: P0      A      C      G      T
01     51    126     42    381      t
02      2      0    502     96      G
03    106    493      1      0      C
04      0    598      0      2      C
05    600      0      0      0      A
06      1    589      4      6      C
07      2      4    594      0      G
08      0      0      1    599      T
09     58    306    234      2      s
10    327      1    143    129      a
11     93    161    212    134      s
12    154    344     28     74      m
13    285     76     68    171      w
14    171    122     82    225      w
15    157    191     66    186      h
Type: Heterodimer
Binding TFs: Q84LG2 / T01760 (bZIP transcription factor, Basic region leucine zipper, G-box binding protein MFMR)
Q84LG2
Binding Sites: MA1347.1.1
MA1347.1.17
MA1347.1.9
MA1347.1.8
MA1347.1.2
MA1347.1.6
MA1347.1.3 / MA1347.1.5
MA1347.1.7
MA1347.1.4
MA1347.1.18
MA1347.1.19
MA1347.1.11
MA1347.1.16
MA1347.1.15
MA1347.1.20
MA1347.1.10
MA1347.1.13
MA1347.1.12
MA1347.1.14
			
Publications: Martinez-Garcia J. F., Moyano E., Alcocer M. J. C., Martin C. Two bZIP proteins from Antirrhinum flowers preferentially bind a hybrid C-box/G-box motif and help to define a new sub-family of bZIP transcription factors.. Plant J. 13:489-505 (1998). [Pubmed]


O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.