DNA Binding Motif

						

			
Accessions: JDP2_methyl_2 (HT-SELEX2 May2017)

			
Names: JDP2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: gATGAsTCAyc
Weblogo: 
PSSM: P0      A      C      G      T
01   2427   5228  12641   3738      g
02  24034      0      0      0      A
03      0      0      0  24034      T
04      0      1  24034      0      G
05  24034      0      0      0      A
06     66  13149  10885      0      s
07      0      0      0  24034      T
08      0  24034     39      0      C
09  24034      0      0      0      A
10      0   9136    323  14898      y
11   4247  11481   5073   3232      c
Binding TFs: JDP2 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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