DNA Binding Motif

Accessions: MA1037.1 (JASPAR 2024)
Names: MYB24
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 9
Consensus: rarKTaGGy
Weblogo:
PSSM: P0 A C G T
01 293 213 260 235 r
02 369 158 243 231 a
03 287 20 596 97 r
04 25 0 253 722 K
05 50 60 0 889 T
06 542 206 60 192 a
07 53 26 879 42 G
08 51 5 860 84 G
09 39 360 19 582 y
Type: Heterodimer
Binding TFs: Q9SPG9 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9SPG9
Publications: Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.