DNA Binding Motif

Accessions: 2c9l_YZ (3D-footprint 20231221)
Names: BZLF1 TRANS-ACTIVATOR PROTEIN
Organisms: Epstein-Barr virus (strain B95-8) (HHV-4), Human herpesvirus 4
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structure of the Epstein-Barr virus ZEBRA protein
Length: 7
Consensus: TgACTcA
Weblogo:
PSSM: P0 A C G T
01 0 0 0 96 T
02 13 13 54 16 g
03 96 0 0 0 A
04 0 96 0 0 C
05 0 0 0 96 T
06 16 54 13 13 c
07 96 0 0 0 A
Type: Heterodimer
Binding TFs: 2c9l_Y (bZIP transcription factor)
2c9l_Z (bZIP transcription factor)
Binding Sites: 2c9l_A
2c9l_B
Publications: Petosa C, Morand P, Baudin F, Moulin M, Artero J.B, Müller C.W. Structural basis of lytic cycle activation by the Epstein-Barr virus ZEBRA protein. Molecular cell 21:565-72 (2006). [Pubmed]

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