DNA Binding Motif

Accessions: M0669 (AthalianaCistrome v4_May2016)
Names: ANAC042.DAP, T10016;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 20
Consensus: ygCCGTrwhhtyymCGyyry
Weblogo:
PSSM: P0 A C G T
01 11 290 1 298 y
02 87 5 392 116 g
03 66 417 94 23 C
04 0 600 0 0 C
05 0 3 593 4 G
06 0 1 101 498 T
07 181 126 186 107 r
08 181 105 144 170 w
09 171 160 76 193 h
10 178 164 108 150 h
11 136 113 131 220 t
12 122 214 65 199 y
13 143 164 118 175 y
14 314 271 5 10 m
15 28 529 34 9 C
16 14 0 563 23 G
17 48 214 140 198 y
18 131 231 6 232 y
19 354 8 192 46 r
20 68 253 32 247 y
Binding TFs: T10016 (No apical meristem (NAM) protein)
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

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