DNA Binding Motif

						

			
Accessions: MA0632.1 (JASPAR 2024)

			
Names: Tcfl5
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: rkCrCGyGmy
Weblogo: 
PSSM: P0      A      C      G      T
01    263    203    308    226      r
02    113    227    364    296      k
03     58    874     17     51      C
04    372     64    336    227      r
05      6    904     19     71      C
06     71     19    904      6      G
07    227    336     64    372      y
08     51     17    874     58      G
09    296    364    227    113      m
10    226    308    203    263      y
Type: Heterodimer
Binding TFs: Q32NY8 (Helix-loop-helix DNA-binding domain)
Q32NY8
			
Publications: Siep M, Sleddens-Linkels E, Mulders S, van Eenennaam H, Wassenaar E, Van Cappellen WA, Hoogerbrugge J, Grootegoed JA, Baarends WM. Basic helix-loop-helix transcription factor Tcfl5 interacts with the Calmegin gene promoter in mouse spermatogenesis. Nucleic Acids Res 32:6425-36 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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