DNA Binding Motif

						

			
Accessions: JDP2_3 (HT-SELEX2 May2017)

			
Names: JDP2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: srTGACGTCAys
Weblogo: 
PSSM: P0      A      C      G      T
01   2696   3686   4825   2251      s
02   7120   1548   6339    373      r
03      0      0      0  13459      T
04      1     82  13459   3170      G
05  13459      0     14      0      A
06      0  11200      0   2258      C
07      0      0  13459      0      G
08      0     25      0  13459      T
09   3339  13459    111      0      C
10  13459     17      0      0      A
11    376   6135   1604   7323      y
12   2453   4625   3835   2546      s
Binding TFs: JDP2 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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