DNA Binding Motif

						

			
Accessions: fru_SOLEXA_5_FBgn0004652 (FlyZincFinger 1.0 )

			
Names: CG14307
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 24
Consensus: cmcmmmmcmcrmAGTAAyammmmm
Weblogo: 
PSSM: P0      A      C      G      T
01     79    123     64     55      c
02     95    131     89     50      m
03     89    126     81     69      c
04     94    128     83     60      m
05    115    124     72     54      m
06    113    108     88     56      m
07     95    133     82     55      m
08     81    128     76     80      c
09     95    131     71     68      m
10     59    165     80     61      c
11    157     71    107     30      r
12    144    203      0     18      m
13    365      0      0      0      A
14      2      0    362      1      G
15      0      1      1    363      T
16    341      3      0     21      A
17    361      3      1      0      A
18     52    187     20    106      y
19    145     62     87     71      a
20    143    103     68     51      m
21    121    115     83     46      m
22    138    100     89     38      m
23    126    103     73     63      m
24     98    118     67     67      m
Binding TFs: fru (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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