DNA Binding Motif
| Accessions: | gcm (DrosophilaTF 1.1) |
| Names: | gcm |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] |
| Length: | 8 |
| Consensus: | ATGCGGGy |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.8667 0.0222 0.0889 0.0222 A 02 0 0 0 1 T 03 0.0625 0 0.9167 0.0208 G 04 0 0.9792 0.0208 0 C 05 0.0208 0 0.875 0.1042 G 06 0 0 1 0 G 07 0.0208 0 0.9792 0 G 08 0 0.3226 0 0.6774 y |
| Binding TFs: | gcm (GCM motif protein) |
| Binding Sites: | gcm_1 gcm_10 gcm_11 gcm_12 gcm_13 gcm_14 gcm_15 gcm_16 gcm_17 gcm_18 gcm_19 gcm_2 gcm_20 gcm_21 gcm_22 gcm_23 gcm_24 gcm_25 gcm_26 gcm_27 gcm_28 gcm_29 gcm_3 gcm_30 gcm_31 gcm_32 gcm_33 gcm_34 gcm_35 gcm_36 gcm_37 gcm_38 gcm_39 gcm_4 gcm_40 gcm_41 gcm_42 gcm_43 gcm_44 gcm_45 gcm_46 gcm_47 gcm_48 gcm_5 gcm_6 gcm_7 gcm_8 gcm_9 |
| Publications: | Akiyama Y., Hosoya T., Poole A. M., Hotta Y. The gcm-motif: a novel DNA-binding motif conserved in Drosophila and mammals. Proc. Natl. Acad. Sci. USA 93:14912-14916 (1996). [Pubmed] |
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