DNA Binding Motif

Accessions: BARHL2_full_2 (HumanTF 1.0)
Names: BARHL2
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 10
Consensus: syTAAwtGsy
Weblogo:
PSSM: P0 A C G T
01 2559 3919 5159 2898 s
02 2649 5106 2284 4495 y
03 214 0 0 14534 T
04 14534 0 0 0 A
05 14534 0 0 0 A
06 6206 267 2725 14534 w
07 2542 3836 2844 14534 t
08 2886 0 14534 359 G
09 2964 4632 3920 3018 s
10 2399 3972 2225 5937 y
Binding TFs: BARHL2_full (Homeobox domain)
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.