DNA Binding Motif

Accessions: ATHB12 (ArabidopsisPBM 20140210)
Names: ATHB12
Organisms: Arabidopsis thaliana
Libraries: ArabidopsisPBM 20140210 1
1 Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed]
Length: 10
Consensus: taaTgATTGg
Weblogo:
PSSM: P0 A C G T
01 0.2163 0.1780 0.2353 0.3704 t
02 0.5788 0.1907 0.1066 0.1239 a
03 0.6677 0.0463 0.0529 0.2331 a
04 0.0183 0.0352 0.0055 0.9411 T
05 0.0484 0.2006 0.6331 0.1178 g
06 0.9651 0.0066 0.0152 0.0131 A
07 0.0092 0.0081 0.0171 0.9656 T
08 0.0297 0.0105 0.0193 0.9405 T
09 0.1281 0.0184 0.7658 0.0877 G
10 0.2440 0.1448 0.5582 0.0530 g
Binding TFs: ATHB12 (Homeobox domain, Homeobox associated leucine zipper)
Publications: Franco-Zorrilla J.M, López-Vidriero I, Carrasco J.L, Godoy M, Vera P, Solano R. DNA-binding specificities of plant transcription factors and their potential to define target genes. Proceedings of the National Academy of Sciences of the United States of America : (2014). [Pubmed]

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