DNA Binding Motif

						

			
Accessions: MA0516.1 (JASPAR 2024)

			
Names: SP2
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 15
Consensus: gyCCCGCCyCyyccs
Weblogo: 
PSSM: P0      A      C      G      T
01    160    253   1028    245      g
02     39    811    257    579      y
03     52   1386      1    247      C
04      0   1679      7      0      C
05      0   1643      0     43      C
06    174      0   1280    232      G
07      0   1686      0      0      C
08      0   1656      0     30      C
09      0   1108      0    578      y
10    206   1196      0    284      C
11    115    971     99    501      y
12    187    554    325    620      y
13    226    717    401    342      c
14    228    794    408    256      c
15    203    745    422    316      s
Type: Heterodimer
Binding TFs: Q02086 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Q02086
Binding Sites: MA0516.1.1
MA0516.1.10
MA0516.1.11
MA0516.1.12
MA0516.1.13
MA0516.1.14
MA0516.1.15
MA0516.1.16
MA0516.1.17
MA0516.1.18
MA0516.1.19
MA0516.1.2
MA0516.1.20
MA0516.1.3
MA0516.1.4
MA0516.1.5
MA0516.1.6
MA0516.1.7
MA0516.1.8
MA0516.1.9
			
Publications: Terrados G, Finkernagel F, Stielow B, Sadic D, Neubert J, Herdt O, Krause M, Scharfe M, Jarek M, Suske G. Genome-wide localization and expression profiling establish Sp2 as a sequence-specific transcription factor regulating vitally important genes. Nucleic acids research 40:7844-57 (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.