DNA Binding Motif

						

			
Accessions: CG12605_SOLEXA_5_FBgn0035481 (FlyZincFinger 1.0 )

			
Names: CG12605
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 13
Consensus: mCACCTGTtGmvy
Weblogo: 
PSSM: P0      A      C      G      T
01    104    227     51     33      m
02     66    350     22     41      C
03    477      1      5     14      A
04      4    493      0      0      C
05      7    450      1     39      C
06     15      1      2    479      T
07      1      0    489      7      G
08      9      3      1    484      T
09     76      7     91    323      t
10     70     21    384     22      G
11    158    208     70     61      m
12    152    126    138     81      v
13     91    197     84    125      y
Binding TFs: CG12605 (Zinc finger, C2H2 type, Zinc-finger double-stranded RNA-binding, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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