DNA Binding Motif

						

			
Accessions: MA1044.1 (JASPAR 2024)

			
Names: NAC92
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 12
Consensus: tarCAmGccAva
Weblogo: 
PSSM: P0      A      C      G      T
01    227    227    227    318      t
02    318    227    227    227      a
03    559     80    282     80      r
04     22    935     22     22      C
05    909      0      0     91      A
06    430    480      0     91      m
07      0      0   1000      0      G
08    224    497     92    186      c
09    247    607     23    123      c
10    932     23     23     23      A
11    274    299    256    170      v
12    314    229    229    229      a
Type: Heterodimer
Binding TFs: Q9FKA0 (No apical meristem (NAM) protein)
Q9FKA0
			
Publications: Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.