DNA Binding Motif

Accessions: 3fhz_BF (3D-footprint 20231221)
Names: Arginine repressor
Organisms: Mycobacterium tuberculosis, strain ATCC 25618 / H37Rv
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and co-repressor, L-arginine
Length: 14
Consensus: TGAATcnnTAyTCA
Weblogo:
PSSM: P0 A C G T
01 3 3 3 87 T
02 0 0 96 0 G
03 82 14 0 0 A
04 96 0 0 0 A
05 0 0 0 96 T
06 13 61 17 5 c
07 24 24 24 24 n
08 24 24 24 24 n
09 3 4 0 89 T
10 96 0 0 0 A
11 15 24 6 51 y
12 3 0 21 72 T
13 0 96 0 0 C
14 96 0 0 0 A
Type: Heterodimer
Binding TFs: 3fhz_F (Arginine repressor, DNA binding domain, Arginine repressor, C-terminal domain)
3fhz_B (Arginine repressor, DNA binding domain, Arginine repressor, C-terminal domain)
Binding Sites: 3fhz_I
3fhz_J
Publications: Cherney L.T, Cherney M.M, Garen C.R, James M.N. The structure of the arginine repressor from Mycobacterium tuberculosis bound with its DNA operator and Co-repressor, L-arginine. Journal of molecular biology 388:85-97 (2009). [Pubmed]

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