DNA Binding Motif

						

			
Accessions: opa_SOLEXA_FBgn0003002 (FlyZincFinger 1.0 )

			
Names: CG1133
Organisms: Drosophila melanogaster
Libraries: FlyZincFinger 1.0  1
1 Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]
Length: 15
Consensus: mmmsmCCCCCCrcbG
Weblogo: 
PSSM: P0      A      C      G      T
01    772   1045    396    494      m
02    817   1071    523    295      m
03    913    835    541    420      m
04    352    928   1127    300      s
05   1212    883    600     13      m
06    276   2181     51    199      C
07    227   2420      0     62      C
08    221   2341     50     94      C
09     28   2680      0      0      C
10     50   2658      0      0      C
11     41   2128     35    504      C
12    779    577   1317     34      r
13    157   1800    293    457      c
14    409    702    855    741      b
15    223    204   2156    123      G
Binding TFs: opa (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Enuameh MS et al (2013) Global analysis of Drosophila Cys2-His2 zinc finger proteins reveals a multitude of novel recognition motifs and binding determinants. Genome Res. 23(6):928-40. doi: 10.1101/gr.151472.112 [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.