DNA Binding Motif

						

			
Accessions: Atf4_DBD (HumanTF 1.0)

			
Names: Atf4
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 4
Length: 14
Consensus: aggATGAYGCAATm
Weblogo: 
PSSM: P0      A      C      G      T
01    598    125    146    177      a
02    327     37    927    133      g
03     90    322    764    202      g
04   1024     89     67      0      A
05      0      2      0   1061      T
06      1      0   1132      3      G
07   1114      0      0      1      A
08      0    437      2    969      Y
09      0      4   1234      0      G
10      0   1195      0     49      C
11   1083      0      0      0      A
12   1090      2      0      0      A
13      0    156     34   1019      T
14    466    641     55     17      m
Binding TFs: Atf4_DBD (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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