DNA Binding Motif

						

			
Accessions: M0662 (AthalianaCistrome v4_May2016)

			
Names: ANAC053.ampDAP, T12036;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 16
Consensus: CTTGttcymCAAGaAA
Weblogo: 
PSSM: P0      A      C      G      T
01      4    590      0      0      C
02      0      1    102    491      T
03      0      0      0    594      T
04     43     79    458     14      G
05     56    144     19    375      t
06     58    110    112    314      t
07     97    216    147    134      c
08     84    234     81    195      y
09    172    170    141    111      m
10      0    591      0      3      C
11    594      0      0      0      A
12    545     47      2      0      A
13      0      0    594      0      G
14    349     80     41    124      a
15    459     70      0     65      A
16    572      0      0     22      A
Binding TFs: T12036 (No apical meristem (NAM) protein)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.