DNA Binding Motif
| Accessions: | CLOCK_TBX3 (HumanTF2 1.0) |
| Names: | CLOCK_TBX3 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF2 1.0 1 1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
| Notes: | Site type: heterodimeric; Experiment type: CAP-SELEX |
| Length: | 17 |
| Consensus: | sGTGTgrdysgCACGTG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 381 1051 1448 124 s 02 43 121 1448 35 G 03 28 351 65 1448 T 04 62 33 1448 29 G 05 153 189 77 1448 T 06 272 447 1448 656 g 07 629 117 457 245 r 08 435 134 391 487 d 09 346 439 245 418 y 10 343 428 542 135 s 11 242 359 680 167 g 12 65 1448 4 0 C 13 1448 0 68 28 A 14 0 1448 3 82 C 15 150 0 1448 4 G 16 26 6 10 1448 T 17 0 28 1448 112 G |
| Type: | Heterodimer |
| Binding TFs: | CLOCK_TF1 / CLOCK_TF2 (Helix-loop-helix DNA-binding domain) TBX3_TF2 (T-box) |
| Publications: | Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed] |
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