DNA Binding Motif

Accessions: 1z9c_A (3D-footprint 20231221)
Names: Organic hydroperoxide resistance transcriptional regulator
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal structure of OhrR bound to the ohrA promoter: Structure of MarR family protein with operator DNA
Length: 9
Consensus: AcnATTnAA
Weblogo:
PSSM: P0 A C G T
01 73 5 2 16 A
02 11 56 16 13 c
03 24 24 24 24 n
04 79 5 7 5 A
05 5 5 5 81 T
06 2 5 5 84 T
07 24 24 24 24 n
08 96 0 0 0 A
09 96 0 0 0 A
Binding TFs: 1z9c_A (MarR family, MarR family, Winged helix DNA-binding domain)
Binding Sites: 1z9c_G
1z9c_H
Publications: Hong M, Fuangthong M, Helmann J.D, Brennan R.G. Structure of an OhrR-ohrA operator complex reveals the DNA binding mechanism of the MarR family. Molecular cell 20:131-41 (2005). [Pubmed]

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