DNA Binding Motif

						

			
Accessions: ATF4_3 (HT-SELEX2 May2017)

			
Names: ATF4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 14
Consensus: rgATGACGTCATcy
Weblogo: 
PSSM: P0      A      C      G      T
01   6617    570  16674   1594      r
02   2111   2228  17381   4379      g
03  18249   5780    491      0      A
04      3      5      1  20083      T
05      1      3  20084      8      G
06  20080      2      9      1      A
07      0  20004      1     80      C
08      3      0  20085      0      G
09      4      9     12  20080      T
10      0  20084      1      1      C
11  20083      2      3      2      A
12      0    521   5709  18291      T
13   4381  17378   2315   2025      c
14   1610  16709    569   6598      y
Binding TFs: ATF4 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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