DNA Binding Motif

						

			
Accessions: DcuR (RegulonDB 7.5)

			
Names: DcuR, DcuR transcriptional activator
Organisms: ECK12
Libraries: RegulonDB 7.5 1
1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed]
Length: 17
Consensus: TkwwTTwAaTTwykwwA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0      6      T
02      0      0      2      4      k
03      3      0      1      2      w
04      3      0      0      3      w
05      0      0      0      6      T
06      1      0      0      5      T
07      2      0      0      4      w
08      6      0      0      0      A
09      4      1      1      0      a
10      0      0      1      5      T
11      0      0      1      5      T
12      2      0      0      4      w
13      1      2      0      3      y
14      1      0      2      3      k
15      3      0      0      3      w
16      4      0      0      2      w
17      6      0      0      0      A
Binding TFs: ECK120008762 (Response regulator receiver domain)
Binding Sites: ECK120011350
ECK120011352
ECK120011976
ECK120035052
ECK125141266
ECK125141268
			
Publications: Davies SJ., Golby P., Omrani D., Broad SA., Harrington VL., Guest JR., Kelly DJ., Andrews SC. Inactivation and regulation of the aerobic C(4)-dicarboxylate transport (dctA) gene of Escherichia coli. J Bacteriol. 181(18):5624-35 (1999). [Pubmed]


Khristiuk VM., Vedrova IN. [Dispensary method of serving children with several skin diseases] Vopr Okhr Materin Det. 21(2):83-5 (1976). [Pubmed]


Scheu PD., Witan J., Rauschmeier M., Graf S., Liao YF., Ebert-Jung A., Basche T., Erker W., Unden G. The CitA/CitB two-component system regulating citrate fermentation in Escherichia coli and its relation to the DcuS/DcuR system in vivo. J Bacteriol  (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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