DNA Binding Motif

Accessions: MYF6 (SMILE-seq 1.0)
Names: MYF6
Organisms: Homo sapiens
Libraries: SMILE-seq 1.0 1
1 Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]
Length: 11
Consensus: yaACAgkTGwy
Weblogo:
PSSM: P0 A C G T
01 0.057 0.295 0.246 0.402 y
02 0.662 0.078 0.202 0.059 a
03 0.725 0.138 0.083 0.054 A
04 0.026 0.912 0.023 0.039 C
05 0.872 0.043 0.054 0.031 A
06 0.066 0.076 0.635 0.222 g
07 0.163 0.167 0.257 0.414 k
08 0.023 0.043 0.031 0.903 T
09 0.056 0.026 0.892 0.025 G
10 0.326 0.16 0.172 0.342 w
11 0.111 0.314 0.112 0.463 y
Binding TFs: MYF6 (Helix-loop-helix DNA-binding domain, Myogenic Basic domain)
Publications: Isakova A, Groux R, Imbeault M, Rainer P, Alpern D, Dainese R, Ambrosini G, Trono D, Bucher P, Deplancke B. SMiLE-seq identifies binding motifs of single and dimeric transcription factors. Nat Methods 14:316-322 (2017). [Pubmed]

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