DNA Binding Motif

						

			
Accessions: pan (DrosophilaTF 1.1)

			
Names: pan
Organisms: Drosophila melanogaster
Libraries: DrosophilaTF 1.1 1
1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed]
Length: 11
Consensus: CCTTTGATCTT
Weblogo: 
PSSM: P0      A      C      G      T
01      0      1      0      0      C
02      0      1      0      0      C
03      0      0      0      1      T
04      0      0      0      1      T
05      0      0      0      1      T
06      0      0      1      0      G
07      1      0      0      0      A
08      0      0      0      1      T
09      0      1      0      0      C
10      0      0      0      1      T
11      0      0      0      1      T
Binding TFs: pan (HMG (high mobility group) box, N-terminal CTNNB1 binding, Domain of unknown function (DUF1898))
			
Publications: van der Wetering M., Cavallo R., Dooijes D., van Beest M., van Es J., Loureiro J., Ypma A., Hursh D., Jones T., Bejsovec A., Peifer M., Mortin M., Clevers H. Armadillo coactivates transcription driven by the product of the drosophila segment polarity gene dTCF. Cell 88:789-799 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.