DNA Binding Motif

						

			
Accessions: MA0621.1 (JASPAR 2024)

			
Names: mix-a
Organisms: Xenopus laevis
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 11
Consensus: artTAATTAgk
Weblogo: 
PSSM: P0      A      C      G      T
01    312    229    229    229      a
02    345    150    261    244      r
03    130    146     46    679      t
04      0      0      0   1000      T
05   1000      0      0      0      A
06   1000      0      0      0      A
07      0      0      0   1000      T
08      0      0      0   1000      T
09    938     21     21     21      A
10    228    100    488    184      g
11    205    205    290    301      k
Type: Heterodimer
Binding TFs: P21711 (Homeobox domain)
P21711
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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