DNA Binding Motif
| Accessions: | ResD (DBTBS 1.0) |
| Names: | ResD |
| Organisms: | Bacillus subtilis |
| Libraries: | DBTBS 1.0 1 1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed] |
| Length: | 11 |
| Consensus: | AATyTTGTGAm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.77 0 0 0.23 A 02 0.77 0 0 0.23 A 03 0 0 0 1 T 04 0 0.37 0 0.63 y 05 0 0 0 1 T 06 0 0 0 1 T 07 0 0 1 0 G 08 0 0 0 1 T 09 0 0 0.85 0.15 G 10 1 0 0 0 A 11 0.37 0.63 0 0 m |
| Binding TFs: | ResD (Response regulator receiver domain, Transcriptional regulatory protein, C terminal) |
| Binding Sites: | ctaA_1 ctaA_2 ctaB cydA_2 fnr_1 hmp_1 nasD_1 ymaA_1 |
| Publications: | Paul S, Zhang X, Hulett F.M. Two ResD-controlled promoters regulate ctaA expression in Bacillus subtilis. Journal of bacteriology 183:3237-46 (2001). [Pubmed] Zhang X, Hulett F.M. ResD signal transduction regulator of aerobic respiration in Bacillus subtilis: ctaA promoter regulation. Molecular microbiology 37:1208-19 (2000). [Pubmed] Sun G, Sharkova E, Chesnut R, Birkey S, Duggan M.F, Sorokin A, Pujic P, Ehrlich S.D, Hulett F.M. Regulators of aerobic and anaerobic respiration in Bacillus subtilis. Journal of bacteriology 178:1374-85 (1996). [Pubmed] Liu X, Taber H.W. Catabolite regulation of the Bacillus subtilis ctaBCDEF gene cluster. Journal of bacteriology 180:6154-63 (1998). [Pubmed] Puri-Taneja A, Schau M, Chen Y, Hulett F.M. Regulators of the Bacillus subtilis cydABCD operon: identification of a negative regulator, CcpA, and a positive regulator, ResD. Journal of bacteriology 189:3348-58 (2007). [Pubmed] Nakano M.M, Zuber P, Glaser P, Danchin A, Hulett F.M. Two-component regulatory proteins ResD-ResE are required for transcriptional activation of fnr upon oxygen limitation in Bacillus subtilis. Journal of bacteriology 178:3796-802 (1996). [Pubmed] Nakano M.M, Zhu Y. Involvement of ResE phosphatase activity in down-regulation of ResD-controlled genes in Bacillus subtilis during aerobic growth. Journal of bacteriology 183:1938-44 (2001). [Pubmed] LaCelle M, Kumano M, Kurita K, Yamane K, Zuber P, Nakano M.M. Oxygen-controlled regulation of the flavohemoglobin gene in Bacillus subtilis. Journal of bacteriology 178:3803-8 (1996). [Pubmed] Nakano M.M, Zhu Y, Lacelle M, Zhang X, Hulett F.M. Interaction of ResD with regulatory regions of anaerobically induced genes in Bacillus subtilis. Molecular microbiology 37:1198-207 (2000). [Pubmed] Nakano M.M, Hoffmann T, Zhu Y, Jahn D. Nitrogen and oxygen regulation of Bacillus subtilis nasDEF encoding NADH-dependent nitrite reductase by TnrA and ResDE. Journal of bacteriology 180:5344-50 (1998). [Pubmed] Härtig E, Hartmann A, Schätzle M, Albertini A.M, Jahn D. The Bacillus subtilis nrdEF genes, encoding a class Ib ribonucleotide reductase, are essential for aerobic and anaerobic growth. Applied and environmental microbiology 72:5260-5 (2006). [Pubmed] |
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