DNA Binding Motif

						

			
Accessions: MA0336.1 (JASPAR 2024)

			
Names: MGA1
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 21
Consensus: wrsrhtAtAGAACAythhwwm
Weblogo: 
PSSM: P0      A      C      G      T
01    384     91    206    317      w
02    305    124    376    194      r
03    240    268    318    172      s
04    367    171    306    154      r
05    252    280    194    273      h
06    116    204    230    448      t
07    787      3    198     11      A
08    192    110    166    531      t
09    701    197     98      2      A
10      5      2    989      2      G
11    990      2      3      2      A
12    990      2      2      5      A
13     12    815     15    156      C
14    844     39     82     32      A
15     68    505     70    355      y
16    203    180    195    419      t
17    301    353     84    260      h
18    291    268     97    342      h
19    441     70    229    257      w
20    440    168    105    285      w
21    342    295    216    144      m
Type: Heterodimer
Binding TFs: P53050 (HSF-type DNA-binding)
P53050
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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