DNA Binding Motif

						

			
Accessions: 5nj8_AB (3D-footprint 20231221)

			
Names: Aryl hydrocarbon receptor
Organisms: Homo sapiens
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Structural basis for aryl hydrocarbon receptor mediated gene activation
Length: 8
Consensus: TtgCGTGA
Weblogo: 
PSSM: P0      A      C      G      T
01      8      8      8     72      T
02     16      8     16     56      t
03     16     16     48     16      g
04      0     96      0      0      C
05      0      0     96      0      G
06      0      0      0     96      T
07      0      0     96      0      G
08     96      0      0      0      A
Type: Heterodimer
Binding TFs: 5nj8_A (Helix-loop-helix DNA-binding domain, PAS fold)
5nj8_B (Helix-loop-helix DNA-binding domain, PAS fold)
Binding Sites: 5nj8_E
5nj8_F
			
Publications: Schulte KW, Green E, Wilz A, Platten M, Daumke O. Structural Basis for Aryl Hydrocarbon Receptor-Mediated Gene Activation. Structure 25:1025-1033 (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.