DNA Binding Motif

Accessions: 2hzv_A (3D-footprint 2022-04-03)
Names: Nickel-responsive regulator
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: NikR-operator DNA complex
Length: 5
Consensus: TCAta
01 0 0 0 96 T
02 12 84 0 0 C
03 96 0 0 0 A
04 12 12 12 60 t
05 60 12 12 12 a
Binding TFs: 2hzv_A (Ribbon-helix-helix protein, copG family, NikR C terminal nickel binding domain)
Binding Sites: 2hzv_I
Publications: Schreiter E.R, Wang S.C, Zamble D.B, Drennan C.L. NikR-operator complex structure and the mechanism of repressor activation by metal ions. Proceedings of the National Academy of Sciences of the United States of America 103:13676-81 (2006). [Pubmed]


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