DNA Binding Motif

						

			
Accessions: LicT (DBTBS 1.0)

			
Names: LicT
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 33
Consensus: GGATTGTTACTGmkAAAGCAGGCAAAACCTAAA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      2      0      G
02      0      0      2      0      G
03      2      0      0      0      A
04      0      0      0      2      T
05      0      0      0      2      T
06      0      0      2      0      G
07      0      0      0      2      T
08      0      0      0      2      T
09      2      0      0      0      A
10      0      2      0      0      C
11      0      0      0      2      T
12      0      0      2      0      G
13      1      1      0      0      m
14      0      0      1      1      k
15      2      0      0      0      A
16      2      0      0      0      A
17      2      0      0      0      A
18      0      0      2      0      G
19      0      2      0      0      C
20      2      0      0      0      A
21      0      0      2      0      G
22      0      0      2      0      G
23      0      2      0      0      C
24      2      0      0      0      A
25      2      0      0      0      A
26      2      0      0      0      A
28      0      2      0      0      C
29      0      2      0      0      C
30      0      0      0      2      T
31      2      0      0      0      A
32      2      0      0      0      A
33      2      0      0      0      A
Binding TFs: LicT (PRD domain, CAT RNA binding domain)
Binding Sites: bglP_2
bglS_2
			
Publications: Krüger S, Gertz S, Hecker M. Transcriptional analysis of bglPH expression in Bacillus subtilis: evidence for two distinct pathways mediating carbon catabolite repression. Journal of bacteriology 178:2637-44 (1996). [Pubmed]


Krüger S, Hecker M. Regulation of the putative bglPH operon for aryl-beta-glucoside utilization in Bacillus subtilis. Journal of bacteriology 177:5590-7 (1995). [Pubmed]


Steinmetz M, Aymerich S. [Genetic analysis of sacR, a cis-regulator of levan-saccharase synthesis of Bacillus subtilis]. Annales de l'Institut Pasteur. Microbiologie 137A:3-14 (). [Pubmed]


Schnetz K, Stülke J, Gertz S, Krüger S, Krieg M, Hecker M, Rak B. LicT, a Bacillus subtilis transcriptional antiterminator protein of the BglG family. Journal of bacteriology 178:1971-9 (1996). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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