DNA Binding Motif

						

			
Accessions: MA1041.1 (JASPAR 2024)

			
Names: MYB55
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 8
Consensus: ACCTAMCG
Weblogo: 
PSSM: P0      A      C      G      T
01    980      1     16      3      A
02     48    946      2      4      C
03      2    989      2      6      C
04    227     49     23    701      T
05    979      1     16      4      A
06    267    730      1      2      M
07      2    958      1     39      C
08    118     54    756     72      G
Type: Heterodimer
Binding TFs: Q9M118 (Myb-like DNA-binding domain, Myb-like DNA-binding domain)
Q9M118
			
Publications: Zhong R, Ye ZH. MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes. Plant Cell Physiol 53:368-80 (2012). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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