DNA Binding Motif

Accessions: MA1112.1 (JASPAR 2024)
Names: NR4A1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 10
Consensus: waAAGGTCAc
Weblogo:
PSSM: P0 A C G T
01 2464 1742 1789 2386 w
02 5681 440 1245 1015 a
03 8205 12 72 92 A
04 8147 163 15 56 A
05 22 189 8009 161 G
06 34 17 8314 16 G
07 17 28 21 8315 T
08 45 8319 0 17 C
09 6397 418 861 705 A
10 2019 2335 2012 2015 c
Type: Heterodimer
Binding TFs: P22736 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
P22736
Binding Sites: MA1112.1.1
MA1112.1.10
MA1112.1.11
MA1112.1.12
MA1112.1.13
MA1112.1.14
MA1112.1.15
MA1112.1.16
MA1112.1.17
MA1112.1.18
MA1112.1.19
MA1112.1.2
MA1112.1.20
MA1112.1.3
MA1112.1.4
MA1112.1.5
MA1112.1.6
MA1112.1.7 / MA1112.1.8
MA1112.1.9
Publications: Wansa KD, Harris JM, Muscat GE. The activation function-1 domain of Nur77/NR4A1 mediates trans-activation, cell specificity, and coactivator recruitment. J Biol Chem 277:33001-11 (2002). [Pubmed]

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.