DNA Binding Motif

						

			
Accessions: SA0002.1 (JASPAR 2024)

			
Names: at_AC_acceptor
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 20
Consensus: tyyyyytyyyyyytyAGrww
Weblogo: 
PSSM: P0      A      C      G      T
01     79    136     72    261      t
02     81    140     84    243      y
03     68    138     68    274      y
04     79    154     70    245      y
05     72    139     64    273      y
06     51    148     57    292      y
07     44    128     57    319      t
08     52    145     60    291      y
09     48    152     66    282      y
10     75    183     64    226      y
11     67    184     44    253      y
12     52    186     37    273      y
13     53    145     32    318      y
14    131    132    114    171      t
15     20    353      3    172      y
16    548      0      0      0      A
17      0      0    548      0      G
18    159     61    283     45      r
19    149    101     91    207      w
20    150    118    125    155      w
			
Publications: Chong A, Zhang G, Bajic V.B. Information for the Coordinates of Exons (ICE): a human splice sites database. Genomics 84:762-6 (2004). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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