DNA Binding Motif

						

			
Accessions: MA0400.1 (JASPAR 2024)

			
Names: SUT2
Organisms: Saccharomyces cerevisiae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 20
Consensus: wkrwtrAASTCCGArmwwbw
Weblogo: 
PSSM: P0      A      C      G      T
01    333    232    112    321      w
02    225    206    264    303      k
03    269    218    277    233      r
04    354    200    100    345      w
05    248    216    153    381      t
06    522     85    287    104      r
07    940      6     12     40      A
08    971      0     11     16      A
09      0    709    287      2      S
10      1     16      0    981      T
11      2    992      1      2      C
12      1    984     12      1      C
13      2      1    993      2      G
14    789     16    168     24      A
15    523     80    257    137      r
16    375    252    154    217      m
17    338    214    168    279      w
18    279    204    209    306      w
19    163    253    252    330      b
20    281    136    244    338      w
Type: Heterodimer
Binding TFs: Q12286
Q12286
			
Publications: Newburger D.E, Bulyk M.L. UniPROBE: an online database of protein binding microarray data on protein-DNA interactions. Nucleic acids research 37:D77-82 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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