DNA Binding Motif

Accessions: 5bmz_B (3D-footprint 20231221)
Names: HcaR protein
Organisms: Acinetobacter baylyi, strain ATCC 33305 / BD413 / ADP1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of Putative MarR Family Transcriptional Regulator HcaR from Acinetobacter sp. ADP complexed with 24mer DNA.
Length: 8
Consensus: ACTGAnAT
Weblogo:
PSSM: P0 A C G T
01 78 6 6 6 A
02 6 78 6 6 C
03 0 0 0 96 T
04 6 6 78 6 G
05 96 0 0 0 A
06 24 24 24 24 n
07 78 6 6 6 A
08 6 6 6 78 T
Binding TFs: 5bmz_B (MarR family, MarR family, Winged helix-turn-helix DNA-binding, Winged helix DNA-binding domain)
Binding Sites: 5bmz_E / 5bmz_F

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