DNA Binding Motif

						

			
Accessions: MA0989.1 (JASPAR 2024)

			
Names: PHYPADRAFT_153324
Organisms: Physcomitrella patens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 9
Consensus: vrwAAaGyd
Weblogo: 
PSSM: P0      A      C      G      T
01    253    264    261    222      v
02    334    193    255    218      r
03    482     71    118    330      w
04    861     62     13     65      A
05    926     36      0     38      A
06    672    147     52    129      a
07     71     27    898      5      G
08    139    288    195    378      y
09    285    158    297    260      d
Type: Heterodimer
Binding TFs: A9TZW5 (Dof domain, zinc finger)
A9TZW5
			
Publications: Yanagisawa S. Dof1 and Dof2 transcription factors are associated with expression of multiple genes involved in carbon metabolism in maize. Plant J. 21:281-288 (2000). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.