DNA Binding Motif
| Accessions: | CN0001.1 (JASPAR 2024) |
| Names: | LM1 |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 16 |
| Consensus: | kGTTGCCATGGaAACm |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 897 426 2046 1963 k 02 245 21 4899 167 G 03 50 272 55 4955 T 04 168 101 48 5015 T 05 575 278 3849 630 G 06 27 4661 76 568 C 07 19 4822 4 487 C 08 4900 122 117 193 A 09 357 158 209 4608 T 10 1108 4 4205 15 G 11 104 34 5168 26 G 12 2714 1331 272 1015 a 13 3970 97 1052 213 A 14 5095 54 126 57 A 15 81 4880 56 315 C 16 1965 1849 346 1172 m |
| Publications: | Xie X, Mikkelsen T.S, Gnirke A, Lindblad-Toh K, Kellis M, Lander E.S. Systematic discovery of regulatory motifs in conserved regions of the human genome, including thousands of CTCF insulator sites. Proceedings of the National Academy of Sciences of the United States of America 104:7145-50 (2007). [Pubmed] |
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