DNA Binding Motif

						

			
Accessions: M0204 (AthalianaCistrome v4_May2016)

			
Names: ABI5.ampDAP, T10092;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: rrwGrwsACGTGGCa
Weblogo: 
PSSM: P0      A      C      G      T
01    219     55    173    136      r
02    211     79    152    141      r
03    151     51     76    305      w
04     39     21    404    119      G
05    153    124    286     20      r
06    180     98      0    305      w
07      0    278    295     10      s
08    583      0      0      0      A
09      0    583      0      0      C
10      0      0    583      0      G
11      1      0      0    582      T
12      0      0    583      0      G
13      0      0    447    136      G
14     26    557      0      0      C
15    388     45    119     31      a
Binding TFs: T10092 (bZIP transcription factor, Basic region leucine zipper)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.