DNA Binding Motif

						

			
Accessions: DREB1A (Athamap 20091028)

			
Names: DREB1A
Organisms: Arabidopsis thaliana
Libraries: Athamap 20091028 1
1 Bulow L, Engelmann S, Schindler M, Hehl R. AthaMap, integrating transcriptional and post-transcriptional data. Nucleic acids research 37:D983-6 (2009).  [Pubmed]
Length: 14
Consensus: TACTrCCGACAtGA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      1      1      8      T
02      9      1      0      0      A
03      1      7      0      2      C
04      1      0      2      7      T
05      6      0      4      0      r
06      0     10      0      0      C
07      0     10      0      0      C
08      0      0     10      0      G
09     10      0      0      0      A
10      0     10      0      0      C
11      8      2      0      0      A
12      1      2      1      6      t
13      1      1      8      0      G
14      7      1      1      1      A
Binding TFs: DREB1A (AP2 domain)
Binding Sites: DREB1A_1
DREB1A_10
DREB1A_2
DREB1A_3
DREB1A_4
DREB1A_5
DREB1A_6
DREB1A_7
DREB1A_8
DREB1A_9
			
Publications: Maruyama K, Sakuma Y, Kasuga M, Ito Y, Seki M, Goda H, Shimada Y, Yoshida S, Shinozaki K, Yamaguchi-Shinozaki K. 2004. Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. : Plant J. 38:982-93. [Pubmed]


 Narusaka Y, Nakashima K, Shinwari ZK, Sakuma Y, Furihata T, Abe H, Narusaka M, Shinozaki K, Yamaguchi-Shinozaki K. 2003. Interaction between two cis-acting elements, ABRE and DRE, in ABA-dependent expression of Arabidopsis rd29A gene in response to dehydration and high-salinity stresses. Plant J. 34:137-48. [Pubmed]


 Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, Houghton JM, Thomashow MF. 1998. Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16:433-42. [Pubmed]


 Sakuma Y, Maruyama K, Osakabe Y, Qin F, Seki M, Shinozaki K, Yamaguchi-Shinozaki K. 2006. Functional analysis of an Arabidopsis transcription factor, DREB2A, involved in drought-responsive gene expression. Plant Cell 18: 1292-309. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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