DNA Binding Motif

Accessions: MA1202.1 (JASPAR 2018)
Names: AGL55
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2018 1
1 [Pubmed]
Notes: DAP-seq
Length: 6
Consensus: TCACCA
Weblogo:
PSSM: P0 A C G T
01 0 5 4 81 T
02 0 90 0 0 C
03 90 0 0 0 A
04 0 90 0 0 C
05 0 90 0 0 C
06 90 0 0 0 A
Binding TFs: Q9C960 (SRF-type transcription factor (DNA-binding and dimerisation domain))
Publications: Tang W., Perry S. E. Binding site selection for the plant MADS domain protein AGL15: an in vitro and in vivo study.. J. Biol. Chem. 278:28154-28159 (2003). [Pubmed]

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