DNA Binding Motif

Accessions: 1exj_A (3D-footprint 2022-04-03)
Names: MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
Organisms: Bacillus subtilis, strain 168
Libraries: 3D-footprint 2022-04-03 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP
Length: 4
Consensus: cCcT
Weblogo:
PSSM: P0 A C G T
01 13 54 16 13 c
02 0 96 0 0 C
03 13 54 13 16 c
04 0 0 0 96 T
Binding TFs: 1exj_A (MerR family regulatory protein, GyrI-like small molecule binding domain, MerR HTH family regulatory protein)
Binding Sites: 1exj_M
Publications: Heldwein E.E, Brennan R.G. Crystal structure of the transcription activator BmrR bound to DNA and a drug. Nature 409:378-82 (2001). [Pubmed]

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