DNA Binding Motif

						

			
Accessions: GlnR (DBTBS 1.0)

			
Names: GlnR
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 17
Consensus: TGTcAcrAAAwcTwACA
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0      1      T
02      0      0      1      0      G
03   0.15      0      0   0.85      T
04      0   0.58   0.19   0.22      c
05      1      0      0      0      A
06   0.25   0.65      0   0.11      c
07   0.61      0   0.26   0.13      r
08   0.85      0      0   0.15      A
09      1      0      0      0      A
10   0.85      0      0   0.15      A
11   0.50      0      0   0.50      w
12   0.25   0.65      0   0.11      c
13      0      0      0      1      T
14   0.33      0      0   0.67      w
15      1      0      0      0      A
16      0      1      0      0      C
17      1      0      0      0      A
Binding TFs: GlnR (MerR family regulatory protein, MerR HTH family regulatory protein)
Binding Sites: glnR_1
glnR_2
nasA_1
nasB_1
ureA_1
ureA_2
			
Publications: Gutowski J.C, Schreier H.J. Interaction of the Bacillus subtilis glnRA repressor with operator and promoter sequences in vivo. Journal of bacteriology 174:671-81 (1992). [Pubmed]


Nakano M.M, Yang F, Hardin P, Zuber P. Nitrogen regulation of nasA and the nasB operon, which encode genes required for nitrate assimilation in Bacillus subtilis. Journal of bacteriology 177:573-9 (1995). [Pubmed]


Wray L.V, Ferson A.E, Fisher S.H. Expression of the Bacillus subtilis ureABC operon is controlled by multiple regulatory factors including CodY, GlnR, TnrA, and Spo0H. Journal of bacteriology 179:5494-501 (1997). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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