DNA Binding Motif

						

			
Accessions: ARX_DBD (HumanTF 1.0)

			
Names: ARX
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 13
Consensus: hTAATywrATTAa
Weblogo: 
PSSM: P0      A      C      G      T
01   1976   2055   1295   2143      h
02   1442    501    198   7470      T
03   7470     94    554    561      A
04   7470     37     80     30      A
05    552    927    301   7470      T
06    310   2506    646   4963      y
07   2678   1310   1460   2021      w
08   5425    528   2044    160      r
09   7470    221    676    247      A
10     71    143     49   7470      T
11   1132    758    155   7470      T
12   7470    122    297    721      A
13   3048   1333   1849   1240      a
Binding TFs: ARX_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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