DNA Binding Motif

Accessions: MA1077.1 (JASPAR 2024)
Names: WRKY18
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: mhrGTCAAss
Weblogo:
PSSM: P0 A C G T
01 290 262 204 244 m
02 258 279 152 312 h
03 392 16 585 8 r
04 1 1 988 11 G
05 0 0 2 997 T
06 1 997 0 2 C
07 985 8 2 5 A
08 964 10 11 16 A
09 186 372 289 153 s
10 212 254 398 135 s
Type: Heterodimer
Binding TFs: Q9C5T4 (WRKY DNA -binding domain)
Q9C5T4
Binding Sites: MA1077.1.7
MA1077.1.1
MA1077.1.10
MA1077.1.11
MA1077.1.12
MA1077.1.13
MA1077.1.14
MA1077.1.15
MA1077.1.16
MA1077.1.17
MA1077.1.18
MA1077.1.19
MA1077.1.2
MA1077.1.20
MA1077.1.3
MA1077.1.4
MA1077.1.5
MA1077.1.6
MA1077.1.8
MA1077.1.9
Publications: Yu D, Chen C, Chen Z. 2001. Evidence for an important role of WRKY DNA binding proteins in the regulation of NPR1 gene expression. Plant Cell. 13:1527-40. [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.