DNA Binding Motif

						

			
Accessions: ARNTL_2 (HT-SELEX2 May2017)

			
Names: ARNTL
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: rtCACGTGms
Weblogo: 
PSSM: P0      A      C      G      T
01  12410   6606  23826   2859      r
02  13903   8184  12651  36236      t
03    744  36236    195     56      C
04  36236    402   2865   1020      A
05      0  36236    163   1374      C
06   1081    111  36236      0      G
07    861   2947    362  36236      T
08     76      0  36236   1350      G
09  15132  21104   6440  10253      m
10   7571  11467  10201   6996      s
Binding TFs: ARNTL (Helix-loop-helix DNA-binding domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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