DNA Binding Motif
| Accessions: | MA0468.1 (JASPAR 2024) |
| Names: | DUX4 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | TAAyyyAATCA |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 7297 2495 979 27446 T 02 37001 0 1216 0 A 03 38217 0 0 0 A 04 5228 11675 2002 19312 y 05 0 16478 4981 16758 y 06 0 13951 6127 18139 y 07 35278 2889 0 50 A 08 38217 0 0 0 A 09 0 0 0 38217 T 10 0 37408 0 809 C 11 33798 0 0 4419 A |
| Type: | Heterodimer |
| Binding TFs: | Q9UBX2 (Homeobox domain) Q9UBX2 |
| Binding Sites: | MA0468.1.1 MA0468.1.10 MA0468.1.11 MA0468.1.12 MA0468.1.13 MA0468.1.14 MA0468.1.15 MA0468.1.16 MA0468.1.17 MA0468.1.18 MA0468.1.19 MA0468.1.2 MA0468.1.20 MA0468.1.3 MA0468.1.4 MA0468.1.5 MA0468.1.6 MA0468.1.7 MA0468.1.8 MA0468.1.9 |
| Publications: | Geng L.N, Yao Z, Snider L, Fong A.P, Cech J.N, Young J.M, van der Maarel S.M, Ruzzo W.L, Gentleman R.C, Tawil R, Tapscott S.J. DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy. Developmental cell 22:38-51 (2012). [Pubmed] |
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