DNA Binding Motif

Accessions: MA0473.1 (JASPAR 2024)
Names: ELF1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 13
Consensus: rramCmGGAAGTg
Weblogo:
PSSM: P0 A C G T
01 4134 2167 5587 1630 r
02 6990 1502 3563 1463 r
03 7978 1207 2318 2015 a
04 4086 4589 3111 1732 m
05 924 10007 2587 0 C
06 8929 4589 0 0 m
07 0 0 13518 0 G
08 0 0 13518 0 G
09 13518 0 0 0 A
10 13518 0 0 0 A
11 1183 0 12335 0 G
12 1571 2094 179 9674 T
13 2634 1735 8125 1024 g
Type: Heterodimer
Binding TFs: P32519 (Ets-domain, Transcription factor protein N terminal)
P32519
Binding Sites: MA0473.1.1
MA0473.1.10
MA0473.1.11
MA0473.1.12
MA0473.1.13
MA0473.1.14
MA0473.1.15
MA0473.1.16
MA0473.1.17
MA0473.1.18
MA0473.1.19
MA0473.1.2
MA0473.1.20
MA0473.1.3
MA0473.1.4
MA0473.1.5
MA0473.1.6
MA0473.1.7
MA0473.1.8
MA0473.1.9
Publications: Wei G-H, Badis G, Berger MF, Kivioja T, Palin K, Enge M, Bonke M, Jolma A, Varjosalo M, Gehrke AR, Yan J, Talukder S, Turunen M, Taipale M, Stunnenberg HG, Ukkonen E, Hughes TR, Bulyk ML, Taipale J. Genome-wide analysis of ETS family DNA-binding in vitro and in vivo. The EMBO Journal. Epub 2010 Jun 1. doi:10.1038/emboj.2010.106 [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.