DNA Binding Motif

						

			
Accessions: DBP_full (HumanTF 1.0), MA0639.1 (JASPAR 2024)

			
Names: DBP
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1, JASPAR 2024 2
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2, HT-SELEX
Length: 12
Consensus: krTTAYRTAAya
Weblogo: 
PSSM: P0      A      C      G      T
01   1552   1714   1903   1930      k
02   3706   1130   3393     93      r
03      5      4      2   7100      T
04      4      6    602   7100      T
05   7100      0    498      4      A
06      2   7100     21   2664      Y
07   3180     17   7100      1      R
08      3    541      7   7100      T
09   7100    288      7      6      A
10   7100      1      2      2      A
11    158   3707   1543   3393      y
12   2574   1657   1747   1122      a
Type: Heterodimer
Binding TFs: Q10586 (Basic region leucine zipper)
DBP_full (Basic region leucine zipper)
Q10586
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]


Xu Z, Kaga S, Tsubomizu J, Fujisaki J, Mochiduki A, Sakai T, Tsukamura H, Maeda K, Inoue K, Adachi AA. Circadian transcriptional factor DBP regulates expression of Kiss1 in the anteroventral periventricular nucleus. Mol Cell Endocrinol : (2011). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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