DNA Binding Motif

						

			
Accessions: MA0493.1 (JASPAR 2024)

			
Names: Klf1
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 11
Consensus: rrCCACACCCw
Weblogo: 
PSSM: P0      A      C      G      T
01    150     76    202     98      r
02    167     40    305     14      r
03     67    396     32     31      C
04     13    461      0     52      C
05    404    118      0      4      A
06      0    526      0      0      C
07    400      0     97     29      A
08      0    526      0      0      C
09      0    526      0      0      C
10      0    508      0     18      C
11    280     35      0    211      w
Type: Heterodimer
Binding TFs: P46099 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
P46099
Binding Sites: MA0493.1.1
MA0493.1.10
MA0493.1.11
MA0493.1.12
MA0493.1.13
MA0493.1.14
MA0493.1.15
MA0493.1.16
MA0493.1.17
MA0493.1.18
MA0493.1.19
MA0493.1.2
MA0493.1.20
MA0493.1.3
MA0493.1.4
MA0493.1.5
MA0493.1.6
MA0493.1.7
MA0493.1.8
MA0493.1.9
			
Publications: Miller I. J., Bieker J. J. A novel, erythroid cell-specific murine transcription factor that binds to the CACCC element and is related to the Krueppel family of nuclear proteins. Mol. Cell. Biol. 13:2776-2786 (1993). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.