DNA Binding Motif

Accessions: 1tro_AG (3D-footprint 20231221)
Names: PROTEIN (TRP REPRESSOR)
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF TRP REPRESSOR OPERATOR COMPLEX AT ATOMIC RESOLUTION
Length: 9
Consensus: gtACTGTaC
Weblogo:
PSSM: P0 A C G T
01 11 7 64 14 g
02 14 22 14 46 t
03 96 0 0 0 A
04 0 96 0 0 C
05 0 0 0 96 T
06 0 0 96 0 G
07 0 0 0 96 T
08 49 10 16 21 a
09 7 78 3 8 C
Type: Heterodimer
Binding TFs: 1tro_A (Trp repressor protein)
1tro_G (Trp repressor protein)
Binding Sites: 1tro_I
1tro_J
Publications: Otwinowski Z., Schevitz RW., Zhang RG., Lawson CL., Joachimiak A., Marmorstein RQ., Luisi BF., Sigler PB. Crystal structure of trp repressor/operator complex at atomic resolution. Nature. 335(6188):321-9 (1988). [Pubmed]

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